Data/Code for "High-frequency and long-term observations of endangered salmonid eDNA in a coastal stream: temporal dynamics, relationships with environmental factors, and comparisons to conventional observations"

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Abstract/Contents

Abstract

Data and Python Code for the Scott Creek eDNA study conducted in 2019 and 2020. Datasets include Environmental Sample Processor (ESP) logs, qPCR output and standards, eDNA concentrations, environmental data, and fish trap counts. Code used to aggregate and analyze data for the manuscript.

Collaboration between the Monterey Bay Aquarium Research Institute (MBARI), the Monterey Bay Aquarium, Stanford University, and the National Atmospheric and Oceanic Administration (NOAA).

Description

Type of resource Dataset, text
Date created [ca. March 1, 2019 - September 1, 2021]
Date modified December 5, 2022
Publication date September 29, 2021

Creators/Contributors

Author Searcy, Ryan ORCiD icon https://orcid.org/0000-0001-8332-1819 (unverified)
Author Boehm, Alexandria
Author Weinstock, Chloe
Author Preston, Christina
Author Jensen, Scott
Author Birch, James
Author Scholin, Christopher
Author Van Houtan, Kyle
Author Kiernan, Joseph
Author Yamahara, Kevan

Subjects

Subject eDNA
Subject Environmental Sample Processor
Subject autonomous sampling
Subject salmonids
Genre Data
Genre Documentation
Genre Tabular data
Genre Code
Genre Data
Genre Data sets
Genre Dataset
Genre Tables (data)
Genre Computer program

Bibliographic information

Access conditions

Use and reproduction
User agrees that, where applicable, content will not be used to identify or to otherwise infringe the privacy or confidentiality rights of individuals. Content distributed via the Stanford Digital Repository may be subject to additional license and use restrictions applied by the depositor.
License
This work is licensed under a Creative Commons Attribution 4.0 International license (CC BY).

Preferred citation

Preferred citation
Searcy, R., Boehm, A., Weinstock, C., Preston, C., Jensen, S., Birch, J., Scholin, C., Van Houtan, K., Kiernan, J., and Yamahara, K. (2021). Data/Code for "High-frequency and long-term observations of endangered salmonid eDNA in a coastal stream: temporal dynamics, relationships with environmental factors, and comparisons to conventional observations". Stanford Digital Repository. Available at https://purl.stanford.edu/xn861qv4853

Collection

Boehm Research Group at Stanford

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