Discovery and development of novel dirhodium catalysts for selective intermolecular allylic C-H amination

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Abstract/Contents

Abstract
Metal-catalyzed C--H functionalization has had an immense impact on streamlining synthesis by enabling previously inaccessible synthetic disconnections in organic synthesis and late-stage diversification of complex molecules. Dirhodium tetracarboxylate catalysts represent the state-of-the-art for intermolecular C(sp3)--H amination, but struggle to functionalize allylic sites due to the competitive reactivity of alkenes. Further advances in dirhodium-mediated C--H amination will require developing catalysts with enhanced stability and different ligand architectures to control selectivity in reactions with substrates bearing reactive functional groups and numerous C--H bonds. However, carboxylate ligands are inherently limited in their electronic, steric, and geometric tunability, which has severely hampered efforts to expand the scope of dirhodium-catalyzed C--H amination. To move beyond dirhodium tetracarboxylate catalysts, we developed a new, modular family of bridging ligands based on 2-pyridones. This work has advanced by capitalizing on a unique combination of computing tools, including molecular dynamics, transition state analysis, and statistical modeling, in a rationally connected feedback loop. These novel dirhodium catalysts mediate intermolecular allylic C−H amination with unprecedented selectivity. The most effective catalyst, Rh2(btz)3(O2CtBu), features one carboxylate and three substituted 2-pyridone ligands that create a spatially complex, conformationally dynamic reactive site. In addition to mediating high yielding amination reactions, these catalysts challenge the paradigm that rigid, well-defined ligand frameworks are optimal for controlling reaction outcomes. Our results demonstrate the versatility of 2-pyridone-derived ligands for optimizing catalyst performance. In addition, this work represents the first successful divergence from dirhodium tetracarboxylate complexes for catalyzing intermolecular C--H amination reactions. More broadly, our design blueprint showcases how data science and computational techniques can be implemented synergistically to help advance reaction design. By capitalizing on the efficiency of dirhodium-catalyzed intermolecular C--H amination reactions, we have developed a novel strategy for constructing saturated azacycles from readily available precursors. The preparation of substituted azetidines and larger ring, nitrogen-containing saturated heterocycles is enabled through efficient and selective intermolecular sp3-C--H amination of alkyl bromide derivatives. A range of substrates are demonstrated to undergo C--H amination and subsequent sulfamate alkylation in good to excellent yield. N-Phenoxysulfonyl-protected products can be unmasked under neutral or mild basic conditions to yield the corresponding cyclic secondary amines. The preparative convenience of this protocol is demonstrated through gram-scale and telescoped multistep procedures. Application of this technology is highlighted in a nine-step total synthesis of an unusual azetidine-containing natural product, penaresidin B.

Description

Type of resource text
Form electronic resource; remote; computer; online resource
Extent 1 online resource.
Place California
Place [Stanford, California]
Publisher [Stanford University]
Copyright date 2022; ©2022
Publication date 2022; 2022
Issuance monographic
Language English

Creators/Contributors

Author Betz, Kerry Nicole
Degree supervisor Du Bois, Justin
Thesis advisor Du Bois, Justin
Thesis advisor Burns, Noah
Thesis advisor Waymouth, Robert M
Degree committee member Burns, Noah
Degree committee member Waymouth, Robert M
Associated with Stanford University, Department of Chemistry

Subjects

Genre Theses
Genre Text

Bibliographic information

Statement of responsibility Kerry N. Betz.
Note Submitted to the Department of Chemistry.
Thesis Thesis Ph.D. Stanford University 2022.
Location https://purl.stanford.edu/vw246vc2555

Access conditions

Copyright
© 2022 by Kerry Nicole Betz
License
This work is licensed under a Creative Commons Attribution Non Commercial 3.0 Unported license (CC BY-NC).

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