Automated handling of Drosophila for biological investigation

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Abstract/Contents

Abstract
The fruit fly, Drosophila melanogaster, is a key model species for biological research. Trained humans can manipulate, inspect and dissect individual flies, but these operations are often rate-limiting bottlenecks for screening and experimentation. Here I present a high-speed, economical robot for handling non-anesthetized adult flies. Using machine vision the robot tracks a fly's thorax and gently grabs it ~400 ms after targeting. The robot can then translate and rotate the picked fly, inspect its phenotype, dissect or release it, and thereby rapidly prepare multiple flies sequentially for a wide range of experimental formats. In one illustration, the robot restrained flies and dissected the cuticle to permit two-photon imaging of neural dynamics. In another, the robot sorted flies by sex. The robot's tireless capacity for accurate, repeatable manipulations will enable experiments and biotechnology applications that would otherwise be totally infeasible, especially those requiring high-throughput capture, testing and assessment of individual fly attributes.

Description

Type of resource text
Form electronic; electronic resource; remote
Extent 1 online resource.
Publication date 2013
Issuance monographic
Language English

Creators/Contributors

Associated with Ho, Eric Tatt Wei
Associated with Stanford University, Department of Electrical Engineering.
Primary advisor Schnitzer, Mark Jacob, 1970-
Primary advisor Shenoy, Krishna V. (Krishna Vaughn)
Thesis advisor Schnitzer, Mark Jacob, 1970-
Thesis advisor Shenoy, Krishna V. (Krishna Vaughn)
Thesis advisor Clandinin, Thomas R. (Thomas Robert), 1970-
Advisor Clandinin, Thomas R. (Thomas Robert), 1970-

Subjects

Genre Theses

Bibliographic information

Statement of responsibility Eric Tatt Wei Ho.
Note Submitted to the Department of Electrical Engineering.
Thesis Thesis (Ph.D.)--Stanford University, 2013.
Location electronic resource

Access conditions

Copyright
© 2013 by Tatt Wei Ho
License
This work is licensed under a Creative Commons Attribution Non Commercial No Derivatives 3.0 Unported license (CC BY-NC-ND).

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