RibonanzaUBR_output

Name: RibonanzaUBR_output
License: https://creativecommons.org/licenses/by/4.0/legalcode

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Abstract/Contents

Abstract: Project contains all the library design FASTA data, reverse-transcription RTB primers used in library prep, and the output files of Ultraplex-Bowtie2-RNAFramework (UBR) bioinformatics pipeline for the following libraries: Coronavirus 5' proximal stem-loop 5 (SL5) M2seq, Alternative Chemical Mapping, Eternal OpenKnotRound1RFAM-120k, MutationMap, DasBigLib15k-100, Positives240, DasBigLib1M-100, DasBigLib2-1M-130. All the sequencing run FASTQ files are available in National Center for Biotechnology Information BioProject: PRJNA1077399.

Author	Stanford Biochemistry Das Lab
Author	Huang, Rui
Author	Das, Rhiju
Author	Nye, Grace
Author	Kretsch, Rachael
Author	Wu, Yuan
Data contributor	Eterna Community

Subject	Ribonanza
Subject	output
Subject	Ultraplex-Bowtie2-RNAFramework
Genre	Mixed materials
Genre	Code
Genre	Data
Genre	Text
Genre	Computer program
Genre	Data sets
Genre	Dataset

DOI	https://doi.org/10.25740/sg697rz2807
Location	https://purl.stanford.edu/sg697rz2807

Use and reproduction: User agrees that, where applicable, content will not be used to identify or to otherwise infringe the privacy or confidentiality rights of individuals. Content distributed via the Stanford Digital Repository may be subject to additional license and use restrictions applied by the depositor.
License: This work is licensed under a Creative Commons Attribution 4.0 International license (CC BY).

Preferred citation: Stanford Biochemistry Das Lab, Huang, R., Das, R., Nye, G., Kretsch, R., and Wu, Y. (2024). RibonanzaUBR_output. Stanford Digital Repository. Available at https://purl.stanford.edu/sg697rz2807. https://doi.org/10.25740/sg697rz2807.

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