Vaccine-induced reprogramming of innate immunity to stimulate broad protection against diverse pathogens

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Abstract/Contents

Abstract
Immunological memory is a fundamental property of the adaptive immune system. Vaccination stimulates the generation of antigen-specific memory B and T cells which can last a lifetime and respond in a heightened manner to a subsequent encounter with the specific pathogen. Emerging evidence suggests that the innate immune response, which has long been thought to be short-lived, can also display a memory-like behavior by remembering an encounter with a microbe and responding more vigorously upon a secondary encounter with a diverse array of microbes. Unlike memory in the adaptive immune system, which is highly antigen-specific, "innate memory" appears to be antigen agnostic. However, the immunological basis of such "innate memory" is poorly defined, and is the subject of this thesis. Here, we used a systems biological approach to analyze the immune responses to adjuvanted and live attenuated vaccines. We mapped out the single cell transcriptomic and epigenomic landscape of lymph nodes following vaccination of mice with an adjuvant that targets TLRs (3M-052, a TLR7/8 agonist emulsified in alum [3M-052/alum]), and the live attenuated yellow fever vaccine (YF-17D). We found 3M-052/alum was capable of inducing a persistent innate antiviral signature in myeloid cells, suggesting the promising use of this adjuvant in enhancing long-lasting innate immunity. In addition, we profiled the immune mechanisms to BCG vaccination, a live attenuated vaccine that has been regarded to have broadly protective effects against diverse pathogens. Our findings revealed the feedback of the BCG-specific CD4 T cells in imprinting an antiviral state in myeloid, and epithelial cells in the lung through IFN-g signaling, leading to protection against SARS-CoV-2 and influenza. These findings provide a framework for the immunological parameters in the design of a broadly protective vaccine against diverse pathogens. We then applied this knowledge to design an adjuvanted vaccine strategy for achieving broad protection. We found repeated intranasal immunization with liposomes containing the TLR ligands GLA/3M-052 and ovalbumin to be potentially effective in antiviral activity against SARS-CoV-2 and influenza. These results pave the way for harnessing the innate immune system in developing a universal vaccine that protects against multiple pathogens.

Description

Type of resource text
Form electronic resource; remote; computer; online resource
Extent 1 online resource.
Place California
Place [Stanford, California]
Publisher [Stanford University]
Copyright date 2023; ©2023
Publication date 2023; 2023
Issuance monographic
Language English

Creators/Contributors

Author Lee, Wei Qi Audrey
Degree supervisor Pulendran, Bali
Thesis advisor Pulendran, Bali
Thesis advisor Davis, Mark
Thesis advisor Engleman, Edgar
Thesis advisor Khatri, Purvesh
Degree committee member Davis, Mark
Degree committee member Engleman, Edgar
Degree committee member Khatri, Purvesh
Associated with Stanford University, School of Medicine
Associated with Stanford University, Department of Microbiology and Immunology

Subjects

Genre Theses
Genre Text

Bibliographic information

Statement of responsibility Wei Qi Audrey Lee.
Note Submitted to the Department of Microbiology and Immunology.
Thesis Thesis Ph.D. Stanford University 2023.
Location https://purl.stanford.edu/qj358xk3945

Access conditions

Copyright
© 2023 by Wei Qi Audrey Lee
License
This work is licensed under a Creative Commons Attribution Non Commercial 3.0 Unported license (CC BY-NC).

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