R scripts and data for "Systematic Discovery of Mutation-Specific Synthetic Lethals by Mining Pan-Cancer Human Primary Tumor Data"

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Abstract/Contents

Abstract: This set contains the R scripts and data used for the tool MiSL described in the paper "Systematic Discovery of Mutation-Specific Synthetic Lethals by Mining Pan-Cancer Human Primary Tumor Data " by S. Sinha, et al. The instructions on how to run the scripts are in the readme.txt file. These scripts demonstrate an example on how to implement the method discussed in the paper of mining synthetic lethals from pan-cancer human primary tumor genomic and transcriptomic data.

Type of resource	software, multimedia
Date created	March 2017

Author	Sinha, Subarna

Related Publication	Sinha, S, et al. (2017). Systematic discovery of mutation-specific synthetic lethals by mining pan-cancer human primary tumor data. Nature Communications. 8:15580. https://doi.org/10.1038/ncomms15580
Location	https://purl.stanford.edu/ny450yx7231

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License: This work is licensed under a Creative Commons Attribution Non Commercial Share Alike 3.0 Unported license (CC BY-NC-SA).

Preferred Citation: Subarna Sinha (2017). R scripts and data for MiSL "Systematic Discovery of Mutation-Specific Synthetic Lethals by Mining Pan-Cancer Human Primary Tumor Data. https://purl.stanford.edu/ny450yx7231

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