Supporting data and code for "Cas9 interrogates DNA in discrete steps modulated by mismatches and supercoiling"
Abstract/Contents
- Abstract
- This repository makes data and code available to readers of Ivanov et al. (PNAS 2020), and relies on that published paper for context. Three archives are included in this collection. “Data in Figures 1-3” and “Data in Supplementary Figures S1-S9” contain all the data presented in figure panels in the main text and supplementary appendix, respectively. “RBT Analysis Code” includes MATLAB scripts used to process raw RBT data, together with a sample file enabling a demonstration calculation. The contents are further described in readme files contained within each archive.
Description
| Type of resource | software, multimedia |
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| Date created | March 2020 |
Creators/Contributors
| Author | Ivanov, Ivan E. |
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| Principal investigator | Bryant, Zev |
Subjects
| Subject | Bioengineering |
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| Subject | Chemical Engineering |
| Subject | Bio-X |
| Genre | Dataset |
Bibliographic information
| Related Publication | Ivan E. Ivanov, Addison V. Wright, Joshua C. Cofsky, Kevin D. Palacio Aris, Jennifer A. Doudna, and Zev Bryant (2020). Cas9 interrogates DNA in discrete steps modulated by mismatches and supercoiling. Proceedings of the National Academy of Sciences; DOI: 10.1073/pnas.1913445117. |
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| Related item | |
| Location | https://purl.stanford.edu/ks501bq7804 |
Access conditions
- Use and reproduction
- User agrees that, where applicable, content will not be used to identify or to otherwise infringe the privacy or confidentiality rights of individuals. Content distributed via the Stanford Digital Repository may be subject to additional license and use restrictions applied by the depositor.
- License
- This work is licensed under a Creative Commons Attribution 3.0 Unported license (CC BY).
Preferred citation
- Preferred Citation
- Ivanov, Ivan E. et al. (2020). Supporting data and code for "Cas9 interrogates DNA in discrete steps modulated by mismatches and supercoiling". Stanford Digital Repository. Available at: https://purl.stanford.edu/ks501bq7804
Collection
Stanford Research Data
View other items in this collection in SearchWorksContact information
- Contact
- zevry@stanford.edu
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