Structure-based cytokine engineering

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Abstract/Contents

Abstract
As a distributed network of cells, the immune system relies on secreted factors such as cytokines and chemokines to coordinate the induction and resolution of inflammation. Cytokine signaling is characterized by a high degree of pleiotropy in which a single cytokine acts on multiple cell types, often with countervailing effects. In many cases, this pleiotropy is critical for ensuring a robust immune response and maintaining tissue homeostasis but can present a problem for the clinical use of cytokines due to multiple responsive cell types. We applied the concept of partial agonism to two cytokines with different biological functions, interleukin 2 (IL-2) and IL-12. In the case of IL-2, we used a previously published structure of the complete IL-2 receptor complex to introduce mutations which attenuate binding to the common gamma chain and reduce receptor dimerization relative to wild-type IL-2. By profiling a diverse set of IL-2 partial agonists with reduced receptor dimerization, we identified a Treg biased agonist, IL-2-REH, which exploits two key features of Treg sensitivity to IL-2, constitutive expression of the IL-2 receptor alpha chain and reduced expression of Suppressor of Cytokine Signaling 1 (SOCS1), a negative regulator of IL-2 signaling. We sought to apply a similar concept to the heterodimeric cytokine IL-12, however, no structure of the IL-12 receptor complex was available. Using a combination of crystallography and cryo-electron microscopy, we solved structures of the IL-12 and closely related IL-23 receptor complexes. In both cases, the shared p40 subunit of IL-12/23 binds to the shared IL-12Rbeta1 receptor while unique four-helix bundles, IL-12p35 and IL-23p19, interact specifically with unique receptors, IL-12Rbeta2 and IL-23R. Guided by these structures, we generated IL-12 partial agonists with reduced binding to IL-12Rbeta1 which preserve T cell mediated anti-tumor immunity without NK cell induced toxicity relative to wild-type IL-12. Cytokine partial agonists present a path to translate structural understanding of cytokine receptor assembly to new molecules with distinct cell-type specific activity. Such agonists may have use clinically by enhancing efficacy, reducing toxicity, or both.

Description

Type of resource text
Form electronic resource; remote; computer; online resource
Extent 1 online resource.
Place California
Place [Stanford, California]
Publisher [Stanford University]
Copyright date 2021; ©2021
Publication date 2022; 2022
Issuance monographic
Language English

Creators/Contributors

Author Glassman, Caleb Randall
Degree supervisor Garcia, K. Christopher
Thesis advisor Garcia, K. Christopher
Thesis advisor Bollyky, Paul
Thesis advisor Ferrell, James Ellsworth
Thesis advisor Jardetzky, Theodore
Degree committee member Bollyky, Paul
Degree committee member Ferrell, James Ellsworth
Degree committee member Jardetzky, Theodore
Associated with Stanford University, Program in Immunology

Subjects

Genre Theses
Genre Text

Bibliographic information

Statement of responsibility Caleb Randall Glassman.
Note Submitted to the Program in Immunology.
Thesis Thesis Ph.D. Stanford University 2022.
Location https://purl.stanford.edu/gb066fk7861

Access conditions

Copyright
© 2021 by Caleb Randall Glassman
License
This work is licensed under a Creative Commons Attribution Non Commercial 3.0 Unported license (CC BY-NC).

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